PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1242070.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 551aa MW: 61368.1 Da PI: 9.3499

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1242070.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.2e-17	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd+l++++v + G++ W+ Ia+ ++ gR +kqc++rw+++l Pd.00g1242070.m01 59 KGFWSKEEDDLIIELVMKQGNKKWSEIAKSLP-GRIGKQCRERWHNHL 105 688***************************.***********97 PP
2	Myb_DNA-binding	49.3	1.2e-15	111	153	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ E++ l++a+k +G++ W+ Ia+ + gR+++++k++w+ Pd.00g1242070.m01 111 RTAWTKAEELTLIEAHKIYGNK-WAEIAKFLH-GRSENSIKNHWN 153 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MVQVKEFDGN LKEEGLVSLS PSVSGSTCDN AVLNLASLQG TDVQCLHRWQ KVLNPDLVKG 60 FWSKEEDDLI IELVMKQGNK KWSEIAKSLP GRIGKQCRER WHNHLNPDIK RTAWTKAEEL 120 TLIEAHKIYG NKWAEIAKFL HGRSENSIKN HWNSSVKKKL ELRSSHTSDM GTQNIKSESR 180 KREVVKQGLD QKANMERNVE TCSLDLNLVL GTANKRESQM QSSDKGNCGW LTKGAAANKM 240 MKTPPRTVFY DRAAAACGLN IEQCQETSSN CGRLRDSHNV TANNHYNNIC NTAPDYLGFP 300 FSHTRNHKPS DPIYLLPSRP LPRPPQASLN AGLGVPGCKR TAGYFINKPV LPVTAQGLYE 360 SSSGPQAYEK KKDGGAPVNS KNSSHGRLCY RPFQLEDVEF YLENSEFPST DSYIQTECSS 420 VSFCTPTSHD TRIFVDCNSP DSTLRSAART FEKSPSIIRK RRHSVSRKSV NAANHGDSVC 480 SKEISNKFRN SPHLLGLSPC GRTNSSSMVH SPPRSQKFGD SAVMKSVEKR LEHAFDVEWD 540 SASAVSRTLS P

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MVQVKEFDGN LKEEGLVSLS PSVSGSTCDN AVLNLASLQG TDVQCLHRWQ KVLNPDLVKG  60
FWSKEEDDLI IELVMKQGNK KWSEIAKSLP GRIGKQCRER WHNHLNPDIK RTAWTKAEEL  120
TLIEAHKIYG NKWAEIAKFL HGRSENSIKN HWNSSVKKKL ELRSSHTSDM GTQNIKSESR  180
KREVVKQGLD QKANMERNVE TCSLDLNLVL GTANKRESQM QSSDKGNCGW LTKGAAANKM  240
MKTPPRTVFY DRAAAACGLN IEQCQETSSN CGRLRDSHNV TANNHYNNIC NTAPDYLGFP  300
FSHTRNHKPS DPIYLLPSRP LPRPPQASLN AGLGVPGCKR TAGYFINKPV LPVTAQGLYE  360
SSSGPQAYEK KKDGGAPVNS KNSSHGRLCY RPFQLEDVEF YLENSEFPST DSYIQTECSS  420
VSFCTPTSHD TRIFVDCNSP DSTLRSAART FEKSPSIIRK RRHSVSRKSV NAANHGDSVC  480
SKEISNKFRN SPHLLGLSPC GRTNSSSMVH SPPRSQKFGD SAVMKSVEKR LEHAFDVEWD  540
SASAVSRTLS P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	2e-61	MYB family protein