PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1244460.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 281aa    MW: 31628.5 Da    PI: 7.2813
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1244460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.88.3e-27121411127
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel..eevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                        lppG+rF P++e+l+++yL +k ++++ e    + i+e+d+y ++P dLp +   ++ +  ++ ++F+ + +       k+r +ksgyW+ +
  Pd.00g1244460.m01  12 LPPGCRFYPSEEQLLCCYLSNKNDADPAESggYDLIRELDLYGHDPFDLPdSacySYGHAGRKRHWFCYTVRVL-----KERRAKSGYWRRK 98 
                        79***********************9966522567**************9535552222334555555555543.....3455699****** PP

                NAM  87 gkdkevlsk.kgelvglkktLvfykgrapk.gektdWvmheyr 127
                        g+d++v+ + ++++ g ++++vfy g++p+ +++tdWv+ +y+
  Pd.00g1244460.m01  99 GRDRDVVGRgGKAVLGRRTSFVFYLGNSPNtAVRTDWVLYQYA 141
                        ********9556678*********997665167*********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGDPKATSLR SLPPGCRFYP SEEQLLCCYL SNKNDADPAE SGGYDLIREL DLYGHDPFDL  60
PDSACYSYGH AGRKRHWFCY TVRVLKERRA KSGYWRRKGR DRDVVGRGGK AVLGRRTSFV  120
FYLGNSPNTA VRTDWVLYQY AQVDHVKASF VLCRVFVRSR HGNRLSYNGV SSCAEESACT  180
VRHIGIQHDG FHTPNIVETE VHGDNSAHRK NEMLSFPMRL DCEINDRVKN GPVSISRLQP  240
NGQVPSSVLG GSNPIFLDDL ATEHLLSIVE GDFIELDDLN D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-21NAC family protein