PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1244520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 122aa    MW: 13707.3 Da    PI: 9.7712
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1244520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.59e-152441055
                AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       +k+g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  Pd.00g1244520.m01  2 RKWGKWVAEIREP---NKRSRIWLGSYTTPVAAARAYDTAVFYLRG 44
                       46**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MRKWGKWVAE IREPNKRSRI WLGSYTTPVA AARAYDTAVF YLRGPSARLN FPELVFQEDG  60
QQLHDMSAAS IRKKATEVGA KVDAVETAHR SPISQSKTTS SLVNSQKPDL NKYPDPENSD  120
EN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.12e-49ERF family protein