PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1248810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 153aa    MW: 17170.5 Da    PI: 4.4813
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1248810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB76.34.4e-24890385
              NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85
                       ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se+++ c re+++ti+++ +l al  lGf +y+e++  
  Pd.00g1248810.m01  8 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCSREEKRTIAPEHVLKALQVLGFSEYIEEVYS 90
                       6899**************************************************************************98754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MDIIGKSKED ASLPKATMTK IIKEMLPPDV RVARDAQDLL IECCVEFINL ISSESNEVCS  60
REEKRTIAPE HVLKALQVLG FSEYIEEVYS AYEQHKLETM HDLAKSVKWG NGAEMTEEEA  120
LAEQQRMFAE ARARMNGGAT APKQPDPEQS LES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.25e-93NF-YB family protein