PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1248810.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YB

Protein Properties

Length: 193aa MW: 21687.6 Da PI: 4.5284

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1248810.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	58.6	1.5e-18	8	76	3	71
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwal 71 ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se+++ c re+++ti+++ +l al Pd.00g1248810.m02 8 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCSREEKRTIAPEHVLKAL 76 6899**************************************************************998 PP
2	NF-YB	38.9	2.1e-12	84	130	39	85
NF-YB 39 vsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 +efi +++se+++ c re+++ti+++ +l al lGf +y+e++ Pd.00g1248810.m02 84 FAEFINLISSESNEVCSREEKRTIAPEHVLKALQVLGFSEYIEEVYS 130 58****************************************98754 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MDIIGKSKED ASLPKATMTK IIKEMLPPDV RVARDAQDLL IECCVEFINL ISSESNEVCS 60 REEKRTIAPE HVLKALQVXX XXAFAEFINL ISSESNEVCS REEKRTIAPE HVLKALQVLG 120 FSEYIEEVYS AYEQHKLETM HDLAKSVKWG NGAEMTEEEA LAEQQRMFAE ARARMNGGAT 180 APKQPDPEQS LES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23090.2	7e-85	NF-YB family protein