PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1248860.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 224aa    MW: 25441.4 Da    PI: 8.3797
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1248860.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.32.8e-164291255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++ GVr+++ +grWvAeI+d s   ++ r +lg+f+ aeeAa a+++a++ l+g
  Pd.00g1248860.m01 42 RFLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDKAARLLRG 91
                       577******.7*********42...36***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDSLDSTKVP ADDQFQTQTF QENKERISAM RKVNSNNISG KRFLGVRQRP SGRWVAEIKD  60
SSQKLRLWLG TFDRAEEAAL AYDKAARLLR GRNAKTNFPC HIMNTHEENC SILRKNPRLY  120
QLLQHAIMKN HAIARSSSMK INPWDRNQIR GIDFDTLVEE TIVCSSSGNS SGQDHDDHED  180
RNKLCALSFG SCKVYSSVVV APSFSTSSQT QCQQEHEEKG YQEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.11e-16ERF family protein