PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1254110.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 493aa MW: 53273.4 Da PI: 6.7399

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1254110.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.5e-16	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l ++vk++G g+W+++ + g+ R++k+c++rw ++l Pd.00g1254110.m01 34 KGPWTAAEDGILMEYVKKHGEGNWNAVQKNSGLARCGKSCRLRWANHL 81 79******************************************9986 PP
2	Myb_DNA-binding	44.5	3.7e-14	87	130	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+ +++E+ l++++++++G++ W++ a+ ++ gRt++++k++w++ Pd.00g1254110.m01 87 KGSLSPDEERLIIELHAKFGNK-WARMASQLP-GRTDNEIKNYWNT 130 57789***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MMLNSSGVDG VHEAEAAAQR GGSHHNHQQR GLKKGPWTAA EDGILMEYVK KHGEGNWNAV 60 QKNSGLARCG KSCRLRWANH LRPNLKKGSL SPDEERLIIE LHAKFGNKWA RMASQLPGRT 120 DNEIKNYWNT RIKRRQRAGL PVYPHDLQPE AAAAAFHHHQ MRHSSPSSSS ASSFSSLLSN 180 SQPRKSSTYS PAQLSLYDHI TTFSSSSDHH NNHTNNYHRN AASLFSNTIT QFNGNGGGFA 240 MPFGSSSSSA LFNQSHNIPN PNPFGSSSAT PPPLHHQYNS HGGFGGYNNL SLSSIIMGPP 300 SYDSTAGLVA GSNAELPSNQ TPPSIQCDEA PMGASGNTNE DDRYEIAPVP SQGNSGLLDD 360 VLAEAHNISN KRLKMQIEST LKNSGDNSAE NQRDDSSSPS SIDMKQSEDP LDEMDDDLLS 420 LLNFSSTVPA VSETSWYLAE CMSNSGSSAS ENVGLDTQQN APLTLTSVKT TAAAPEVQRT 480 LGACYWNNMP GIC

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MMLNSSGVDG VHEAEAAAQR GGSHHNHQQR GLKKGPWTAA EDGILMEYVK KHGEGNWNAV  60
QKNSGLARCG KSCRLRWANH LRPNLKKGSL SPDEERLIIE LHAKFGNKWA RMASQLPGRT  120
DNEIKNYWNT RIKRRQRAGL PVYPHDLQPE AAAAAFHHHQ MRHSSPSSSS ASSFSSLLSN  180
SQPRKSSTYS PAQLSLYDHI TTFSSSSDHH NNHTNNYHRN AASLFSNTIT QFNGNGGGFA  240
MPFGSSSSSA LFNQSHNIPN PNPFGSSSAT PPPLHHQYNS HGGFGGYNNL SLSSIIMGPP  300
SYDSTAGLVA GSNAELPSNQ TPPSIQCDEA PMGASGNTNE DDRYEIAPVP SQGNSGLLDD  360
VLAEAHNISN KRLKMQIEST LKNSGDNSAE NQRDDSSSPS SIDMKQSEDP LDEMDDDLLS  420
LLNFSSTVPA VSETSWYLAE CMSNSGSSAS ENVGLDTQQN APLTLTSVKT TAAAPEVQRT  480
LGACYWNNMP GIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	8e-75	MYB family protein