PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1258380.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 580aa MW: 63756.2 Da PI: 6.3514

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1258380.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.2	1.6e-27	170	222	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr++W++eLH +Fv av+qL G e+A+Pk+il+lm+v+gLt+e+v+SHLQkYRl Pd.00g1258380.m01 170 PRVVWSKELHGKFVAAVHQL-GLERAVPKKILDLMNVQGLTRENVASHLQKYRL 222 8*****************.******************************8 PP
2	Myb_DNA-binding	41.6	3e-13	171	221	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v av+qlG + +k+I m+ +g+t++++ s++qky+ Pd.00g1258380.m01 171 RVVWSKELHGKFVAAVHQLGLEraVPKKILDLMNvQGLTRENVASHLQKYR 221 678***********************************************7 PP
3	Response_reg	85.5	1.6e-28	26	134	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 vl vdD+p+ ++ll+ +l++ +y +v++++++ eal +l+e++ +Dl+++D++mp+mdG++ll+ + e +lp+i++++h+++e++ + + Pd.00g1258380.m01 26 VLAVDDNPICLRLLEGLLQNCQY-QVTTTTQAVEALLMLRESRnrFDLVITDVSMPDMDGFKLLELLGLEM-DLPVIMLSGHSDKELVMKGI 115 799******************.9**********999889*****************96644.8*************** PP HTTESEEEESS--HHHHHH CS Response_reg 91 kaGakdflsKpfdpeelvk 109 + Ga d+l Kp+ +eel++ Pd.00g1258380.m01 116 SHGACDYLLKPVRKEELMN 134 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MTVKAQRGGL VGEDGAMDRF PVGMRVLAVD DNPICLRLLE GLLQNCQYQV TTTTQAVEAL 60 LMLRESRNRF DLVITDVSMP DMDGFKLLEL LGLEMDLPVI MLSGHSDKEL VMKGISHGAC 120 DYLLKPVRKE ELMNIWQHVI RRKKFDSKDQ NKSSSQDKAC HETGEGGQGP RVVWSKELHG 180 KFVAAVHQLG LERAVPKKIL DLMNVQGLTR ENVASHLQKY RLCLKRLSST ATQQASMVAA 240 FGGKDSSYMR MGALDGFGDL RSLPGSRRLS NATLSPYTPG GMLGRLNSPA GLSIRGITSS 300 GLVQPGHSQN LSNSISNLVK LQPALPANQS PNLYESIPTS LELNQLQQGK HTAHIGESNP 360 NNDPTSYSIP SSFPDTSVSV SSIHSDSITS SNPLVLHRNP QQALGMGVFG NWSSLSLASL 420 NPESFDIGIS SNFLDDNRCS ESWQVAVQLS KFPSNDLPMS PAEELRGNMW NQEGLIGDVV 480 PTMDCTPKQR WEEHKRDYNH NLNLTFSATN PTVSANVILS EVEKSATGTK MKPSEDYLWE 540 QTKSHDGLVQ NSYESLNDIM GAIMKGGQNE NMLMDGEFWI

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MTVKAQRGGL VGEDGAMDRF PVGMRVLAVD DNPICLRLLE GLLQNCQYQV TTTTQAVEAL  60
LMLRESRNRF DLVITDVSMP DMDGFKLLEL LGLEMDLPVI MLSGHSDKEL VMKGISHGAC  120
DYLLKPVRKE ELMNIWQHVI RRKKFDSKDQ NKSSSQDKAC HETGEGGQGP RVVWSKELHG  180
KFVAAVHQLG LERAVPKKIL DLMNVQGLTR ENVASHLQKY RLCLKRLSST ATQQASMVAA  240
FGGKDSSYMR MGALDGFGDL RSLPGSRRLS NATLSPYTPG GMLGRLNSPA GLSIRGITSS  300
GLVQPGHSQN LSNSISNLVK LQPALPANQS PNLYESIPTS LELNQLQQGK HTAHIGESNP  360
NNDPTSYSIP SSFPDTSVSV SSIHSDSITS SNPLVLHRNP QQALGMGVFG NWSSLSLASL  420
NPESFDIGIS SNFLDDNRCS ESWQVAVQLS KFPSNDLPMS PAEELRGNMW NQEGLIGDVV  480
PTMDCTPKQR WEEHKRDYNH NLNLTFSATN PTVSANVILS EVEKSATGTK MKPSEDYLWE  540
QTKSHDGLVQ NSYESLNDIM GAIMKGGQNE NMLMDGEFWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	2e-91	ARR-B family protein