PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1259840.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 211aa MW: 23921.2 Da PI: 9.644

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1259840.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.6	1.4e-18	28	74	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + WT+eEd++l+++v+ +G g+W+t++++ g+ R++k+c++rw +yl Pd.00g1259840.m01 28 NLWTPEEDLILKKYVETHGEGNWATVSQRSGLMRSGKSCRLRWKNYL 74 56*******************************************97 PP
2	Myb_DNA-binding	52.5	1.2e-16	80	125	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l Pd.00g1259840.m01 80 RGHMSQEEQDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 125 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MDKKRSSSSV VTWKPAAANA NAQAPKKNLW TPEEDLILKK YVETHGEGNW ATVSQRSGLM 60 RSGKSCRLRW KNYLRPNIKR GHMSQEEQDL IIRMHKLLGN RWSLIAGRLP GRTDNEVKNY 120 WNTHLNKMSC PAATKRKKSP IFTSHHDCLQ YLPTNLNATF LFDHDEPFIA ADAASSSSYL 180 DSFLFFEAFG SSAADMESVL PLACADHHLG W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	3e-62	MYB family protein