PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1260190.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 243aa    MW: 26598.7 Da    PI: 8.1037
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1260190.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-19553153
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                       ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  Pd.00g1260190.m01  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 53
                       59*******9.**********8.....334*********************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA VLMSGRNAKT  60
NFPISTTQTN TNTTTAAAAA MAVGSDPRGS SSDLDHSLSE PKGLSEILHA KLRKCSKLPS  120
PSMTCLRLDN ESSHIGVWQK RAGQRSDNSN WVMTVQLGKK KNSNNTNAAD DHGQSISSSS  180
PLIMSTSESS ASTSSARAPE LIAEMDEEEK IALQMIEELL NRNCPSPSNS SFGIQPGEES  240
FYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-58ERF family protein