PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1261500.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 99aa    MW: 11533.1 Da    PI: 5.9977
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1261500.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.000311941123
                       EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                       y C++Cg + s k +  +H+ tH
  Pd.00g1261500.m01 19 YYCEYCGICRSKKTLIASHMLTH 41
                       89********************6 PP
2zf-C2H223.21.7e-076384223
                       EETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                       +C+ Cg +F+ + +Lk+H+++H
  Pd.00g1261500.m01 63 TCQECGATFKKPAYLKQHMQSH 84
                       6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MGIGEAEEEE PIFRDIRRYY CEYCGICRSK KTLIASHMLT HHKEEMEMAK EADGEGEREK  60
SNTCQECGAT FKKPAYLKQH MQSHSLEDST FLRTILWIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.24e-24C2H2 family protein