PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1261600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 153aa    MW: 17986.3 Da    PI: 5.38
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1261600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.21e-084496253
           trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkek 53
                       Wt++ v +L+e+  ++  +l+r++l+  +W ev++k+ ++ ++er+ +qC+++
  Pd.00g1261600.m01 44 WTEHAVFVLLEVWGDRFLQLGRKSLRSEDWHEVAEKVsEASKIERTDTQCRNS 96
                       *************************************677899*******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MDDMDDDARH TKKRKVKNLE SNYEFAPRVR VPYRDPSSRG EEDWTEHAVF VLLEVWGDRF  60
LQLGRKSLRS EDWHEVAEKV SEASKIERTD TQCRNSGEYV FMNTRVYLER SNGFDEMRDS  120
PGEKLTMMMQ RMFLLRISVN DAGLVFILKD GGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.12e-33Trihelix family protein