PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1264100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 185aa    MW: 20730.4 Da    PI: 4.5696
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1264100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB180.12e-5659154297
              NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                        reqdrflPianvsrimk +l anakiskdaketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+kyrel
  Pd.00g1264100.m01  59 REQDRFLPIANVSRIMKMALQANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQKYREL 150
                        89****************************************************************************************** PP

              NF-YB  94 egek 97 
                        egek
  Pd.00g1264100.m01 151 EGEK 154
                        *997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MHYYPSRSNG PQHLCLSSLI ALRRSPSETP KTPDMADSDN DSGGNNDGSQ AQSGELSARE  60
QDRFLPIANV SRIMKMALQA NAKISKDAKE TVQECVSEFI SFVTGEASDK CQREKRKTIN  120
GDDLLWAMTT LGFEEYVEPL KVYLQKYREL EGEKMTMGGR DKDMEELGLG IVEVQVMVEM  180
VELQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-69NF-YB family protein