PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1265480.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

YABBY

Protein Properties

Length: 145aa MW: 16021.2 Da PI: 7.5645

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1265480.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	101.3	2e-31	22	143	2	118
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee...lleelkveeenlksnvekee 90 ++ s s+q+Cyv+CnfC+t+lavsvP +slfk+vtvrCGhC++llsvn++ + ++hl + + ++ lle+++++ ++ + ++++ + Pd.00g1265480.m01 22 HLLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLSVNMRALLLPPPNNQHLPHPFFNSphnLLEDMRNAPSSNTLMNHQPN 113 56789********************************************99999*****99987734455666655554443333333 PP YABBY 91 sastsvssekl....senedeevprvppvirP 118 +++s + + ++++e+v r+ ++ +P Pd.00g1265480.m01 114 YTNES--IMAIrgggLDHHKESVDRTMEAKKP 143 33222..2223556666777788888887777 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MSSAAASSTA FNLPDQQQQQ QHLLSPSDQL CYVHCNFCDT VLAVSVPCSS LFKTVTVRCG 60 HCSNLLSVNM RALLLPPPNN QHLPHPFFNS PHNLLEDMRN APSSNTLMNH QPNYTNESIM 120 AIRGGGLDHH KESVDRTMEA KKPKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00180.1	1e-22	YABBY family protein