PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1265570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 515aa    MW: 57249.2 Da    PI: 6.4644
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1265570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS362.65.5e-1111465151374
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPil 91 
                        lv++L++cAeav+ +d++ a++lL +l+ +a   g+++qR+a++f+++L+ rla  +  + +  + p ++s+  s+e+  al+l +e++P +
  Pd.00g1265570.m01 146 LVQQLIACAEAVACRDKAHASTLLYELRANAKVFGTSFQRVASCFVQGLSDRLALvQPLGAVGVIGPITKSTAFSAEKDGALHLVYEICPQI 237
                        689***************************************************9333344555556666656699999************* PP

               GRAS  92 kfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                        +f+h++aN  Ilea+ege+ vH+iD++++    +G QW +L+++La+ + ++ ++lRiTgvg+    s+e+l+++g+ L+  A++++++fef
  Pd.00g1265570.m01 238 QFGHFVANASILEAFEGESSVHVIDLGMTlgvpHGYQWRNLIDSLANHAgQPLHHLRITGVGN----SAERLQAIGNDLKLHAQSMKLNFEF 325
                        *************************98653333889***********9955557*********....9************************ PP

               GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
                        ++ v++++e+l+++++++  gE+l++n++lqlh l++es    +   +vL+++ +lsPk++++veq+++hn++ Fl rf+eal+ ysa+fds
  Pd.00g1265570.m01 326 SA-VESSFENLKPQDFNLVDGEVLVINSILQLHCLVKESRGALN---SVLQTLHQLSPKLMILVEQDTSHNGPFFLGRFMEALHNYSAIFDS 413
                        **.799******************************88877777...8******************************************** PP

               GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgW 362
                        l+a lp+ +  r+k+E++++g+ei+n+v+ceg +r+erhe++e+Wr+r+++aGF+ +pl+    +qa   l+    +gy+v e++g+lvlgW
  Pd.00g1265570.m01 414 LDAMLPKYDTRRAKMEQFYFGEEIKNIVSCEGPARVERHERVEQWRRRMRRAGFQLAPLKMI--AQAMKWLEINTCEGYTVVEDKGCLVLGW 503
                        ***********************************************************865..5777777777778*************** PP

               GRAS 363 kdrpLvsvSaWr 374
                        k++p++++S+W+
  Pd.00g1265570.m01 504 KSKPIIATSCWK 515
                        ***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    
MASGLYVQAE FYGDNTSDEV IGLDLNLSSM ACLPYPSSLS TLEENPAAWV IPFIDETTSH  60
KRLKQQHSAS HEFNNAGINY YSLYSGSGSM CARGLDSLPR IHFRDHISAY TRRYLAVEAM  120
EEATATLMRG KEGESEEEGR GDGTKLVQQL IACAEAVACR DKAHASTLLY ELRANAKVFG  180
TSFQRVASCF VQGLSDRLAL VQPLGAVGVI GPITKSTAFS AEKDGALHLV YEICPQIQFG  240
HFVANASILE AFEGESSVHV IDLGMTLGVP HGYQWRNLID SLANHAGQPL HHLRITGVGN  300
SAERLQAIGN DLKLHAQSMK LNFEFSAVES SFENLKPQDF NLVDGEVLVI NSILQLHCLV  360
KESRGALNSV LQTLHQLSPK LMILVEQDTS HNGPFFLGRF MEALHNYSAI FDSLDAMLPK  420
YDTRRAKMEQ FYFGEEIKNI VSCEGPARVE RHERVEQWRR RMRRAGFQLA PLKMIAQAMK  480
WLEINTCEGY TVVEDKGCLV LGWKSKPIIA TSCWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.14e-63GRAS family protein