PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1271910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 485aa    MW: 53315.2 Da    PI: 6.603
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1271910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.41.2e-05125147123
                        EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                        y+Cp+Cg+sF++ ++  +H  t+
  Pd.00g1271910.m01 125 YECPICGQSFRSEDEVSVHVDTC 147
                        99*****************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
MGDKFKEFIK NPFSSSSSGK FKGQGRVLGS SSSGPANSAL LRQSQAPQSK PKPNPVSNSN  60
SNSSSSAASP NPKPSPQKTQ NLDQNQPEFS NNSKPNRKPE NGFDPFDSLI TPGKRSQNGY  120
TLNVYECPIC GQSFRSEDEV SVHVDTCVNT SVDNKSAEGL GVSGSEDIGV GSSRSELEAR  180
IGTFASGNPA TGSVEVVLRL LRNIVKEPEN VKFRKIRMSN PKIREAIGNV VGGIELLEFV  240
GFELKEEEGE MWAMMEVPSE EQISLMKNGI ALLEPPKVQE LQKIENSPSI DTPKVDEQIE  300
PKKVDRQTKV FFSVSESVAA RIELPESFYN LSAMELKREA ETRKKKIEDS QMLIPRSYKE  360
KQAKAAKNRY RKTVVRIQFP DGVVLQGVFS PWESTSSLYE YVSSALKEPS LEFELLNPVA  420
IKRRVIPHFP RAGEKAATLA DEDLVPSALV KFKPIETDSV VFTGLCNELL EISEPLTSRS  480
AVAPV