PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g127240.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 233aa    MW: 26353 Da    PI: 7.3727
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g127240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.52.4e-1311673595
                      EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                      t tl+ +sg+ W+v l  + +++r+v+ kGW++Fvk++ L+   f+vF +dg+s+f   v+
  Pd.00g127240.m01 11 TCTLRGPSGECWTVGL--ELRGDRFVFCKGWQGFVKDHSLEIANFLVFDYDGKSKF--DVT 67
                      679*************..999999***************************99888..444 PP
2B345.51.4e-141342201399
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       s+   +pk  a + g++k+    +++ed++g sW+vkl+    +    r    ++tkG ++  +an++  gD++vF+l +++++ +++ +fr 
  Pd.00g127240.m01 134 SNAHNIPKALAVAKGLIKK---SVKVEDPNGISWDVKLRLdgkE---HRcdrLFMTKGLSKCFHANNISLGDTLVFELFNTKRGGMKIYIFRG 220
                       555679****999999964...5***************995544...44445*************************99999999*****996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNYVNGRLPP TCTLRGPSGE CWTVGLELRG DRFVFCKGWQ GFVKDHSLEI ANFLVFDYDG  60
KSKFDVTMYD PIGTEKELEP AEKRRGNRAR VEEEIIELET EEPDEESEED ARISNIRKCK  120
SGKRIATDGG KEKSNAHNIP KALAVAKGLI KKSVKVEDPN GISWDVKLRL DGKEHRCDRL  180
FMTKGLSKCF HANNISLGDT LVFELFNTKR GGMKIYIFRG NSNVLLDASN VEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.12e-13B3 family protein