PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1272590.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 164aa    MW: 18409.1 Da    PI: 9.071
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1272590.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.34.9e-1368554128
                NAM  54 eekewyfFskrdkkyatgkrknratksgy..Wkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +e+++yfF++ +kk+ +g+r +++ + g   W+++ + k+++++    +++++g k+++ +  +++++  k +Wvmhe+rl
  Pd.00g1272590.m01   6 GETSLYFFTELKKKTGKGSRIEKMSSGGCvtWRNQSN-KAIYVNddepNKTVIGYKRMFSYVLKKTSTKAKGEWVMHEFRL 85 
                        46788******************88877556*98876.67777657878888**********99999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MEEAPGETSL YFFTELKKKT GKGSRIEKMS SGGCVTWRNQ SNKAIYVNDD EPNKTVIGYK  60
RMFSYVLKKT STKAKGEWVM HEFRLAGCLV NNNNQSYEAT LTCPLYDYFF LPSSEVSVDI  120
NVSYLNSAYS GEEVEVEAKA LRVGKVVGVA SVELRKKKTC KIIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.14e-07NAC family protein