PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1272950.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 245aa    MW: 26870.2 Da    PI: 6.0349
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1272950.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.98.1e-21148198256
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                        +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g+
  Pd.00g1272950.m01 148 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRGN 198
                        7********.**********7.....337*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MCLLKVANQR SSGGQYDRFE SSNDDDHGEE AYTYEGQPQA AAGNIDHELM NQLPHQNVSP  60
TMFLGYSRPT EMSAMAQFME SAQRVYRGSY GDFRATTQAE SSSGATVTEE ATNAVTTTTT  120
ATAASAVPST PSSSETVSFE EPGERRRRYR GVRQRPWGKW AAEIRDPHKA ARVWLGTFDT  180
AEAAARAYDE AALRFRGNRA KLNFPENNQQ LGFFHPPRNQ INPGGSSDFP APSWSQSGNN  240
PSSSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144149ERRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.11e-14ERF family protein