PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1273210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 709aa MW: 78848.1 Da PI: 4.5176

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1273210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	91	2.1e-28	52	128	52	129
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++++ +wyfF++r+kky++g+r +rat+ gyWk+tgkd++vl +ge+vg ktL+f++grap+g +t+Wvmheyrle Pd.00g1273210.m01 52 ESGDLKWYFFCPREKKYRNGNRIQRATEGGYWKTTGKDRSVLY-SGEVVGWIKTLIFHTGRAPRGDRTNWVMHEYRLE 128 456779***********************************.999***************************85 PP
2	NAM	87.8	1.9e-27	341	415	54	129
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ +wyfF++r+kky++g+r +rat+ gyWk+tgkd++vl +g+ vg ktL+f++grap+g +t+Wvmheyrle Pd.00g1273210.m01 341 GDLKWYFFCPREKKYRSGNRIQRATEGGYWKTTGKDRSVLY-SGAIVGWIKTLIFHTGRAPSGDRTNWVMHEYRLE 415 5669***********************************.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
MREIAKRGRE NRERELRQIE KSEVSRIVCS CLSISFSILG SSFCTRCKSC WESGDLKWYF 60 FCPREKKYRN GNRIQRATEG GYWKTTGKDR SVLYSGEVVG WIKTLIFHTG RAPRGDRTNW 120 VMHEYRLEDQ GLADRGVPLD SYVICMIFQK DGLGPKIGAQ YGAPFKEEDW TDDEAEICSE 180 AIAHENMCEP NLVVPSNCNS SITTSGHSPK GIHTSPSESC ISDVLPPSCN IHQLVSSNHV 240 TMEKLHGSDD DILSMLNCFT EGSTSLMKEN DKNEELGNVI PSGNAGATPN FSSDDIYEDL 300 GDLGKMARCS QFARLCSCFS ISFSILGPSF CTRYKSCWDC GDLKWYFFCP REKKYRSGNR 360 IQRATEGGYW KTTGKDRSVL YSGAIVGWIK TLIFHTGRAP SGDRTNWVMH EYRLEDQGLA 420 DRGVPLDSYV LCMIFQKEGL GPRIGAQYGA PFKEEDWSDD EVEITSEAVQ VAITPEPDLG 480 LPCNYVSPTA TNAHSVGDIG VGPSGSGIYD ILPPFCEVSQ PVSSNYVTLE MPLASVGDDI 540 ISMFDCFTEE SALYTDGPKK VEVEGRLETV QNANMPSTHS PEVIGVGPSF ESCAFDVLPP 600 CNVNESFVTM ENPPASNGDE TLPIMDCFAE ESVFLVNDNG KNEELNNLEH LGNATPHFNT 660 SNIYEDLGDL ENLGRVGEVG YNFCSEPDSR SHFLELYDLD QPQHPNLFF

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

MREIAKRGRE NRERELRQIE KSEVSRIVCS CLSISFSILG SSFCTRCKSC WESGDLKWYF  60
FCPREKKYRN GNRIQRATEG GYWKTTGKDR SVLYSGEVVG WIKTLIFHTG RAPRGDRTNW  120
VMHEYRLEDQ GLADRGVPLD SYVICMIFQK DGLGPKIGAQ YGAPFKEEDW TDDEAEICSE  180
AIAHENMCEP NLVVPSNCNS SITTSGHSPK GIHTSPSESC ISDVLPPSCN IHQLVSSNHV  240
TMEKLHGSDD DILSMLNCFT EGSTSLMKEN DKNEELGNVI PSGNAGATPN FSSDDIYEDL  300
GDLGKMARCS QFARLCSCFS ISFSILGPSF CTRYKSCWDC GDLKWYFFCP REKKYRSGNR  360
IQRATEGGYW KTTGKDRSVL YSGAIVGWIK TLIFHTGRAP SGDRTNWVMH EYRLEDQGLA  420
DRGVPLDSYV LCMIFQKEGL GPRIGAQYGA PFKEEDWSDD EVEITSEAVQ VAITPEPDLG  480
LPCNYVSPTA TNAHSVGDIG VGPSGSGIYD ILPPFCEVSQ PVSSNYVTLE MPLASVGDDI  540
ISMFDCFTEE SALYTDGPKK VEVEGRLETV QNANMPSTHS PEVIGVGPSF ESCAFDVLPP  600
CNVNESFVTM ENPPASNGDE TLPIMDCFAE ESVFLVNDNG KNEELNNLEH LGNATPHFNT  660
SNIYEDLGDL ENLGRVGEVG YNFCSEPDSR SHFLELYDLD QPQHPNLFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	7e-63	NAC family protein