PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1273660.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 238aa    MW: 26134.6 Da    PI: 6.9382
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1273660.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.4e-1282128554
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        +  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ +++L
  Pd.00g1273660.m01  82 KACREKMRRDRLNDRFLELSSMLEPG---RPPKTDKAAILGDAVRVVNQL 128
                        678**********************8...89***************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MGSPPQNHNW VFDYGVLEDI PVPGGDLPPL DLPGFTWPSH SFVAPAAPSV DFDDSFGNSD  60
SIKESGCRKR VRSGSCNVTG SKACREKMRR DRLNDRFLEL SSMLEPGRPP KTDKAAILGD  120
AVRVVNQLRG EAQQLKDSNG DLQEKINELK AEKNELRDEK QRLKTEKENI ERQIKALNTQ  180
PGFLPHPAAI PGPFSAPGQV VGGKLMPFVG YPGVSMWQFM PPAAVDTSQD HVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-92bHLH family protein