PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g127480.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 229aa    MW: 24319 Da    PI: 10.1534
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g127480.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-202575256
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      +y+GVr ++ +gr++AeIrdp   gk++r++lg+f+taeeAa+a+++a+++++g+
  Pd.00g127480.m01 25 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDKAAREFRGA 75
                      59*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MAPTSPKSPT KSGSETPSPN SKEIRYRGVR KRPWGRYAAE IRDPGKKTRV WLGTFDTAEE  60
AARAYDKAAR EFRGAKAKTN FPTPAELQLE AAANINSHNN NNVPKAAAAN NSPSQSSTVE  120
SSSPPPPPLD LALAPHFAAA GGYFTAASGF RAVPVARPVL FFDAFARAEN AAALQRAREM  180
CRFERAVAGP SSGGAHSDSS SSSVVDFDRS LPNGRLDLDL NLPPPSEVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.11e-28ERF family protein