PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1275360.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 253aa    MW: 28769.2 Da    PI: 4.7859
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1275360.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-18114164255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +l+g
  Pd.00g1275360.m01 114 SYRGVRRRP-WGKYAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFALRG 164
                        69*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEMESANFFQ FYSASDFSPE SSFGSLDSLS WEDEEALLLP FNNPNEMMSF LPFDMNDSEE  60
MLLYDAVAKG AKETFSSHDD QANCFNIGVV KEEEVTSNIA HHQAFEEKPT TEKSYRGVRR  120
RPWGKYAAEI RDSTRHGIRV WLGTFDSAEA AALAYDQAAF ALRGSLAVLN FPAQVVQKSL  180
QDIKYKHDEG CSPVVALKRK HSMRRKSMSK KSKAIISQQC TEQRVKELSP QNNVMVFEDL  240
GVEYLEELLE QSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-47ERF family protein