PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1275840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 381aa    MW: 42678.9 Da    PI: 4.3727
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1275840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.44e-25101421128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                        lp+Gf+F+P+d++l+ +yL +kv+g+++  ++vi+e+d+y k+ePwd+ +    +  a+ +++yfF+k ++ + +++r+ r++ sg+Wk   
  Pd.00g1275840.m01  10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYDNVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRAARTIGSGTWKGEN 101
                        79**************************99999*****99568*****742444222366799**************************999 PP

                NAM  88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        + ++v +   k+++ g+ k + +   + ++ +   W+mhey+l
  Pd.00g1275840.m01 102 SGTTVSDPenKENDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142
                        999999886566779999999886..566667999******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MAPCEFAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYD NVIPEMDLYG KIEPWDIWHE  60
YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGSGTWKGE NSGTTVSDPE NKENDLGIWK  120
RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTTEEDNE  180
TDTPVQSQNK RQRPQQVTSF EELIGDCTPM SEATGVGGSV SYLPTGLTQS QPDSSFAYPT  240
TVVSSQARAN YIDDVSQFHG GGDGDALMSD FSHSDTAQPF TEQALGSYAV CNQERASDVY  300
ETQQGLALTD NNIGYWPSPF GSEEDQVNEL DFSMDYDLLN HLIDCDDDND GPRQSSTAQF  360
MGMGMENTTT ASSEANMVII D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167173RGKRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.15e-18NAC family protein