PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1276480.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 109aa    MW: 11998.1 Da    PI: 8.2229
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1276480.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.11.8e-1425903499
                       SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                         ++l+d++gr W+vkl+ + ++gr ++t+G     +an++  gD++vF+l++rse  + +++fr+
  Pd.00g1276480.m01 25 ERVMLKDPNGRPWNVKLRLSENGGRLLMTQGLVACWQANNISLGDTIVFELVKRSEMDMEIHIFRT 90
                       369***************************************************9999******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MILPCVLTCL PCERRAVAEG LLGKERVMLK DPNGRPWNVK LRLSENGGRL LMTQGLVACW  60
QANNISLGDT IVFELVKRSE MDMEIHIFRT GAGGNMCSVV LDASSSVKH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.13e-07B3 family protein