PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1277570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 244aa    MW: 27058.8 Da    PI: 4.6535
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1277570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.2e-05120142123
                        EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                        ykCp+C+  F  ++nL  H+  H
  Pd.00g1277570.m01 120 YKCPKCPCEFAFSENLDAHMADH 142
                        9*******************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MLCSLAAFEV SHNLCYDTSS HNQLKDPTRL STIELTGNND FPHTPVSLSF PGRNFSYFSW  60
NEPDLYVERT NLSELRSYQP SNPIVNSLAA QLQYNVGSDP SLTNGVSTRR PLHRSKHTPY  120
KCPKCPCEFA FSENLDAHMA DHCRIEAQTN LMISSDSASR WMNSDSPMVH SQFTWNPKDL  180
AGTEASSSNS DGETSNEDVE KEEMACAKAF LLANNAENEG QPTANLDTED AILSITKSIK  240
EVAI