PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1278230.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 373aa MW: 41615.2 Da PI: 6.7115

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1278230.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	106.6	1.3e-33	108	209	1	100
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k ltpsdv+k++rlv+pk++ae++ gg+ ++ l++edesg+sW+++++y+++s++yvltkGW+++vk+++L++gD+v+F++ +++ Pd.00g1278230.m01 108 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgGGD--SGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVLFERRRSH 197 99*************************7666..6679********************************************88779 PP EE..EEEEE-SS CS B3 89 efelvvkvfrks 100 + +l+++++r+s Pd.00g1278230.m01 198 TDRLFIGWRRRS 209 999****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MSINHFSSDH PETQWWPNTA HQQQQDPSRP HFLPQFCQDT HHHNYQAWLN SQEQPTPMSP 60 TPPTPTTLNF NLNQNDAESD HANQLQHQLL LQSSPPLDDH DEENEPMFEK PLTPSDVGKL 120 NRLVIPKQHA EKYFPLGGGD SGLLLSFEDE SGKSWRFRYS YWNSSQSYVL TKGWSRYVKE 180 KRLDAGDVVL FERRRSHTDR LFIGWRRRSA AATPSAHDSG PGATQVSGGA GESSGSGSAG 240 GWTRMFYSAP QHNNNDGGSS YPAHQYRNHS VAPYPPDCLH AAGSGVQSMS QTTSSVGSSK 300 ILRLFGVNLE CQQQADHESE PSTPDGSSSL SMSSSQGPTP HHHLYPRAAY DYGADQRDFS 360 FSRDGNPMRN RRG

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MSINHFSSDH PETQWWPNTA HQQQQDPSRP HFLPQFCQDT HHHNYQAWLN SQEQPTPMSP  60
TPPTPTTLNF NLNQNDAESD HANQLQHQLL LQSSPPLDDH DEENEPMFEK PLTPSDVGKL  120
NRLVIPKQHA EKYFPLGGGD SGLLLSFEDE SGKSWRFRYS YWNSSQSYVL TKGWSRYVKE  180
KRLDAGDVVL FERRRSHTDR LFIGWRRRSA AATPSAHDSG PGATQVSGGA GESSGSGSAG  240
GWTRMFYSAP QHNNNDGGSS YPAHQYRNHS VAPYPPDCLH AAGSGVQSMS QTTSSVGSSK  300
ILRLFGVNLE CQQQADHESE PSTPDGSSSL SMSSSQGPTP HHHLYPRAAY DYGADQRDFS  360
FSRDGNPMRN RRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	3e-52	B3 family protein