PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1278390.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 285aa    MW: 32162.6 Da    PI: 7.0176
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1278390.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM135.24.4e-4241391127
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                        lppGfrF Pt+eelv++yL++k+eg++      +++vi+ + i++++PwdLp+    +++++ ++w+fF++r++++a+g r++r t++gyWk
  Pd.00g1278390.m01   4 LPPGFRFYPTEEELVSFYLQNKLEGRRddlnRVMDRVIPVLYINEYNPWDLPQfsgeACHGDPEQWFFFIPRQESEARGGRPRRLTTTGYWK 95 
                        79*************************665333344788899**********656655555777**************************** PP

                NAM  85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                        atg+   v+s+ +++++glk+t+vfy+grap+g+kt+W m+ey+
  Pd.00g1278390.m01  96 ATGSPSFVYSSnSNRAIGLKRTMVFYNGRAPHGRKTEWKMNEYK 139
                        *********9866778***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MEDLPPGFRF YPTEEELVSF YLQNKLEGRR DDLNRVMDRV IPVLYINEYN PWDLPQFSGE  60
ACHGDPEQWF FFIPRQESEA RGGRPRRLTT TGYWKATGSP SFVYSSNSNR AIGLKRTMVF  120
YNGRAPHGRK TEWKMNEYKA IEAHHADQNQ PLIASSSSNT PSAPTLRQEF SLCRVYKKSK  180
CLRAFDRRPL GVETMSNPSL NLNQTAAAHE GAGHQGQGSA SHSRNPLMGS DQRTNSSSPE  240
SSSSGDHHGP QPPSQPAGET GTLPMFNDNE ALWDLEQLMI NNNWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-63NAC family protein