PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1283600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 1005aa    MW: 114131 Da    PI: 8.8368
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1283600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.61.9e-10390434246
                        SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        ++WT+ Ed+ l+++v++ G ++W  Ia  +g++Rt+ qc  r+q 
  Pd.00g1283600.m01 390 KSWTAKEDKNLLHLVQEKGIDNWFNIAVLLGTNRTPFQCLARYQR 434
                        58*****************************************96 PP
2Myb_DNA-binding41.72.7e-13443486246
                        SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          WT++Ed +l  av+ lG g+W ++a+ +  gRt+ qc +rw k
  Pd.00g1283600.m01 443 REWTKDEDARLRLAVEALGEGDWQSVASALE-GRTGSQCSNRWKK 486
                        68*****************************.***********98 PP
3Myb_DNA-binding44.82.9e-14496539246
                        SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        grWT+eEd++l+ a  ++G+++W++ a+ ++ gRt  qc++r+ +
  Pd.00g1283600.m01 496 GRWTPEEDKRLKVAQMLFGPKNWNKTAQFVP-GRTQAQCRDRYVN 539
                        8******************************.***********77 PP
4Myb_DNA-binding44.92.6e-14548591247
                        SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        g WT+eEd +l +a++++G   W+++a++++ +Rt+++c  rw  +
  Pd.00g1283600.m01 548 GEWTEEEDSRLREAIAEYGYC-WSKVAACVP-RRTDNMCWRRWKVL 591
                        68*****************99.*********.***********865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1005 aa     Download sequence    
MEAIRRACML TGTNPDDLNP NNNNQGGGDL RHSSGSESES DSDEVDDDIE LLRKIRSRFS  60
NISDFCEPLS LKPLSSLPPA VSDDEEDDYQ TLLSVQKRFA AYQNDTCKPV KETCNEIAHE  120
SSHESSQGTE DACMAIHPLS DNAEGQPSAS IELQQSDSCR PSTLPAKYST FPKSAQVFMD  180
AIKKNRSSQK FLRSKLVQIE AKIEENRKLK ERVKILKDFQ VSCKKRTGEA LSQKKDPRVQ  240
LILVNRPRKF RDLKAHDKKI SAMFYAPEEN SHVANYRMTL TKFLHSLDRK KWSKAEKKAL  300
EKGIRQQFQE MVLQFSVHES SCSERPYGDS NHIDDILASI KDLEITPEKI REFLPKVNWE  360
QLASMYIVGR SGGECEARWL NWEDPLINHK SWTAKEDKNL LHLVQEKGID NWFNIAVLLG  420
TNRTPFQCLA RYQRSLNASI LKREWTKDED ARLRLAVEAL GEGDWQSVAS ALEGRTGSQC  480
SNRWKKSLHP TRKREGRWTP EEDKRLKVAQ MLFGPKNWNK TAQFVPGRTQ AQCRDRYVNS  540
LEPSLKWGEW TEEEDSRLRE AIAEYGYCWS KVAACVPRRT DNMCWRRWKV LFPDEVSLLK  600
EEKRIRKVAL MCNFVDRETE RPALGPNDFR PPIVTSTKTL TYSRKQKGKL SKVSKKIRSR  660
RQRNNSQSCS KVSEIDNFDK VETCEGHDAS NTKNKVRKQR RIRHKGTEPT GECQVVVTLP  720
CEQDTHKEPR EMSCSDQIVG TSDGDDTTLA CFLRNKSKKR KLGPVPSING KKKRKLVASD  780
SAVQECPANS IQKGCEVHPE MDEVCDGNQI VSFRKDDEFV VHCDDRISDR MPPCSVQSSH  840
LNGNIMASDN EPDGLKLVSG WKAGLQEPVR KVVGIDPESD GDTDDFVLAS LRKKKLKKRH  900
PQNAKSGPHA CPPSGVTTRS EPLPKRVDQS NDRSQVPFVA VGNEPGAVDI GKQHGVDHRE  960
TVKEIVNIGA EGDHEAGDTT LACFLRNKSN NRQRQSRRGD NQKPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1753761LRNKSKKRK
2758775KKRKLGPVPSINGKKKRK
3759776KKRKLGPVPSINGKKKRK
4771776KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.10.0MYB family protein