PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1287780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MIKC_MADS
Protein Properties Length: 204aa    MW: 23169.1 Da    PI: 8.209
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1287780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.87.7e-25957149
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
             SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                       k+ien   rqvtf+kRr+g+lKKA+ELSvLCda++ ++ifss+gkl+e 
  Pd.00g1287780.m01  9 KKIENPVHRQVTFCKRRAGLLKKAKELSVLCDADIGILIFSSHGKLFEL 57
                       68********************************************996 PP
2K-box60.28.4e-2184174999
              K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                        + e+++   ++e++ Lk+eie Lq+ +R + G + ++++l eLq Le++Le  + ++Rs K+++l+++i+ l++ e  l  +nk+L+ k+ 
  Pd.00g1287780.m01  84 AIETQTLDAKKEINLLKQEIEILQKGLRYMFGGGAGTMTLDELQVLEKHLEVWIYHVRSAKMDVLFQEIQLLRNSEGILTAANKYLQDKII 174
                        5567778899******************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MARGKVQMKK IENPVHRQVT FCKRRAGLLK KAKELSVLCD ADIGILIFSS HGKLFELATK  60
GNMQGLIERY MKMKPPQVSQ ADQAIETQTL DAKKEINLLK QEIEILQKGL RYMFGGGAGT  120
MTLDELQVLE KHLEVWIYHV RSAKMDVLFQ EIQLLRNSEG ILTAANKYLQ DKIIEENIGV  180
TNITPMPSDN PYPLTIPDDD IFQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.12e-80MIKC_MADS family protein