PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1287920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 166aa    MW: 18014.8 Da    PI: 5.7024
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1287920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.7e-161867255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       ++kGVr++k +g+Wv+eIr+p   g +  r +lg+f ++e Aa a++ a  +l+ 
  Pd.00g1287920.m01 18 KFKGVRQRK-WGKWVSEIRVP---G-TqDRLWLGSFSSPEAAAVARDIAYYCLRR 67
                       89******9.**********8...3.35************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MSYSSEESSS SPGTGQRKFK GVRQRKWGKW VSEIRVPGTQ DRLWLGSFSS PEAAAVARDI  60
AYYCLRRPST LEGLNFPLVL PSSVHADMSP RSIQKAASDA GMAVDAQLVA NRSPQAGGRQ  120
SNNGSHGVES EVWEDMGESS RTNWGGHMGS GNGYEDLSIS IEDYDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.11e-45ERF family protein