PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1289280.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 209aa    MW: 23010.9 Da    PI: 10.0687
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1289280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.84.7e-144793354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       ++h+e+ErrRR+riN+ +++Lr+llP+      ++ +Ka+ L ++v+++++L
  Pd.00g1289280.m01 47 KSHKEAERRRRQRINTHLSTLRTLLPNT-----TRTDKASLLAEVVQHVREL 93
                       79*************************9.....8***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MLPFLSWSDQ NHYAHDPSLV NLMDGADSIL SPSASMTETS RSAEASKSHK EAERRRRQRI  60
NTHLSTLRTL LPNTTRTDKA SLLAEVVQHV RELRRQAADL ARQDGGSCCG GTTGSEPWPP  120
GLNRDLIQAI RSVRARAIRA EMMTVGGRTK NVVVMQWAGG GGEEEVRALK RALKAVVENR  180
ASCSGPGRLV LGNKRARVYG SVYEDENEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.17e-15bHLH family protein