PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1290330.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 281aa    MW: 32199.3 Da    PI: 7.7028
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1290330.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00057121137117
                        EEETTTTEEESSHHHHH CS
            zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                        ++C+ C k+F+r  nL+
  Pd.00g1290330.m01 121 FSCHVCFKTFNRYNNLQ 137
                        89**********99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MEPSEFSSSS SPFFSANDHV ETLNLFPNYE TPNAHLEPLP LISCLLRSPE HQVPNSHDQN  60
PKACNEDHKE DEVTVALHIG LPEYSDGSVN YLNEKEDENN VTAQKYWIPT PEQILIGFTH  120
FSCHVCFKTF NRYNNLQYRR GPESLKGTQP RAMLSIPCYC CAEGCKNNID HPRAKPLKDF  180
RTLQTHYKRK HGMKPFMCRK CGKLLAVKGD WRTHEKNCGK RWLCICGSDF KHKRSLKDHI  240
KAFGHGHRPF PPNSFDEVRD LDEDTSTTPS LFKGMSSDTT S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.11e-107C2H2 family protein