PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1292780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 649aa MW: 73433.8 Da PI: 5.4516

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1292780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	15.9	2.2e-05	388	445	6	51
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNr 51 ft +++ e+e+l + ++ +s+e ++LA++ ++t +qV+ WFqN+ Pd.00g1292780.m01 388 VFTYSEIMEMENLIKHprQQSLSQEFFQDLATSFsctpiragkpDITWEQVQSWFQNK 445 589999999999999555*************99********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MAASPQPVSE NLIDFRAPPP SPIASGRRSL VTNDEVLTEY LEHSLQVPDL ILPDKFFPKQ 60 NSLENPPTID LLALNLDEFD ASLCKVVESI ARNGCFQLVN HGISSELVSS VQAAATGIFQ 120 VPPEKRAEIT RLPEKPYGFE EVHGEEVGSE LSEEFVWCRD QGLKLTMERI APIGYSNFSE 180 KLETLMTDIE KVSGKILPSL LKNSQTKFVY GNDDMVQGKE LGTVCCLYKH SQNVLEDEWD 240 SSLRYDVIKM LIRGTDYSHA LCLHLCDGSS EFHVYSKKGW VSFTPDKNAL VVTTGDQIQA 300 WSGGQYKHVI GRPIFKGCSA AKPSGLDYFQ LATGSKSRRH RSSSEPGLLS KPPLGVELRL 360 KTEKPREKEM DMELFRTRKR EPMNSLSVFT YSEIMEMENL IKHPRQQSLS QEFFQDLATS 420 FSCTPIRAGK PDITWEQVQS WFQNKQKELQ ANSNSSPTAL ELFVDLSDSN VSSNATENSQ 480 KPKGKWSTEL HELAFEARSA RDDAWYDVAS FLSYRVVNSG ELEVRVRYSG FGREDDEWVN 540 VTRAVRERSI PLEASECHKV KVGDLVLSFQ EREHQAVYCD AHVVDIQRGL HDVTGCKCIF 600 VVRFDHDNTE EEIQLGRLCI RPAQNTSAVT NTQQHDLFRN KDMKFSFLY

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MAASPQPVSE NLIDFRAPPP SPIASGRRSL VTNDEVLTEY LEHSLQVPDL ILPDKFFPKQ  60
NSLENPPTID LLALNLDEFD ASLCKVVESI ARNGCFQLVN HGISSELVSS VQAAATGIFQ  120
VPPEKRAEIT RLPEKPYGFE EVHGEEVGSE LSEEFVWCRD QGLKLTMERI APIGYSNFSE  180
KLETLMTDIE KVSGKILPSL LKNSQTKFVY GNDDMVQGKE LGTVCCLYKH SQNVLEDEWD  240
SSLRYDVIKM LIRGTDYSHA LCLHLCDGSS EFHVYSKKGW VSFTPDKNAL VVTTGDQIQA  300
WSGGQYKHVI GRPIFKGCSA AKPSGLDYFQ LATGSKSRRH RSSSEPGLLS KPPLGVELRL  360
KTEKPREKEM DMELFRTRKR EPMNSLSVFT YSEIMEMENL IKHPRQQSLS QEFFQDLATS  420
FSCTPIRAGK PDITWEQVQS WFQNKQKELQ ANSNSSPTAL ELFVDLSDSN VSSNATENSQ  480
KPKGKWSTEL HELAFEARSA RDDAWYDVAS FLSYRVVNSG ELEVRVRYSG FGREDDEWVN  540
VTRAVRERSI PLEASECHKV KVGDLVLSFQ EREHQAVYCD AHVVDIQRGL HDVTGCKCIF  600
VVRFDHDNTE EEIQLGRLCI RPAQNTSAVT NTQQHDLFRN KDMKFSFLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-56	HB-other family protein