PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1293620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 184aa    MW: 19855.8 Da    PI: 4.4906
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1293620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof70.32.8e-221652238
             zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrr 38
                       ++++lkcprCds ntkfCyynny+lsqPr+fCk+Cr 
  Pd.00g1293620.m01 16 EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRS 52
                       57899******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MQDPTTFQPM KPQFPEQEQL KCPRCDSPNT KFCYYNNYNL SQPRHFCKNC RSSSAATAAA  60
QNPDPQPDRT RVYGPKIDQD RGVLDISGSF SSLLTSNGQF GSLLEGLNPN GSGLKLMQMG  120
DFGVNLDSGN GLNSDPGVNP GLEAQSNGNP ESYMGLQNGD SSSCWNGGNG WPDLAIYTPG  180
SSFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.12e-27Dof family protein