PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1296560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 157aa    MW: 17717.6 Da    PI: 5.6599
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1296560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.63e-08100147555
                AP2   5 GVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        GV+++   gr++A ++d +e +  +k    g f t+eeAa+a++ a++kl+g
  Pd.00g1296560.m01 100 GVSRYT-GGRYEAFLWDNTEpR--SKGKT-GGFETEEEAARAHDLAALKLWG 147
                        9*9999.8*********65543..56655.77*****************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MQQNSPWILE SSPVEAPHCN TFPSANYPFS SSMHVESDQD FIGEKNINDN GINIFGDPFM  60
SYDFINEEDN GRSGEKPMKR KRHCKNSKKK IVQTGSAFYG VSRYTGGRYE AFLWDNTEPR  120
SKGKTGGFET EEEAARAHDL AALKLWGDFA TLNFTVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65510.12e-09AP2 family protein