PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1296960.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 256aa    MW: 29345.6 Da    PI: 9.2166
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1296960.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.93.7e-1311683596
                       EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                 B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                       + tl+d+sg  W+v l  + +++r+++ +GW+ Fvk++ L+    +vF +dg+s+f   v++
  Pd.00g1296960.m01 11 KCTLRDPSGGCWTVGL--EVRGDRFFFHEGWQPFVKDHSLEIANALVFDYDGKSKF--DVTL 68
                       579*************..*********************************99988..5555 PP
2B358.51.2e-18149243699
                        ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                 B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                        ++++  ++ r+ +pk+ a + g++   +k +++ed++g sW+vkl+    + ++gr ++tkGW+e ++an++  gD++vF+l++ + + +++
  Pd.00g1296960.m01 149 IRAMRKNRYRMNFPKELAVAKGLIR--KKSVRVEDPNGISWDVKLRLdekEHNGGRLLMTKGWSECCQANNISLGDTMVFELVNVMHGGMKM 238
                        5566778899************995..557***************99877777778***************************999999*** PP

                        EEE-S CS
                 B3  95 kvfrk 99 
                        ++fr 
  Pd.00g1296960.m01 239 HIFRG 243
                        **996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDHVNGRLPP KCTLRDPSGG CWTVGLEVRG DRFFFHEGWQ PFVKDHSLEI ANALVFDYDG  60
KSKFDVTLYD PIGSEKELEP AKKRRGNRAR VEEEIIELDT EEDSEEDARM SNIRKRKSFK  120
SGKRIARTDS GKETSNAPIV FISKHLCFIR AMRKNRYRMN FPKELAVAKG LIRKKSVRVE  180
DPNGISWDVK LRLDEKEHNG GRLLMTKGWS ECCQANNISL GDTMVFELVN VMHGGMKMHI  240
FRGNSYVVLD ASCVKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.13e-12B3 family protein