PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1297130.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 307aa    MW: 33943.5 Da    PI: 4.3269
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1297130.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.81.7e-09456263
                NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFsk 63
                       ppG rF Ptdeel+v+yL+  ++ +k      i ++diy++ P +L  +k+    ++++ F  
  Pd.00g1297130.m02  4 PPGWRFCPTDEELIVFYLRSFISVRK------IIHLDIYDFTPMQLAvSKL----RKVFNFEA 56
                       9*******************999887......5578**********73222....33333322 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGIPPGWRFC PTDEELIVFY LRSFISVRKI IHLDIYDFTP MQLAVSKLRK VFNFEACVLC  60
KVYETSRGRN SRQNTRNEAN TVSNDVGEQG TNPSTTRSQA EEDQALRFLP LPPPPPNIYG  120
GSSSSSSSSN LAGQYDVHMT NHSDHALNNV SFPQCTWASN GLGAHPEVTT LAPMAHAQLE  180
NSIPLLHSMN IYDQDGYLLN ENIEYYQSTV PYGFEAQSLP MYNNVSQPNN SGYGMAPTDT  240
TEEEEELYLL HEPLPDFSFP IDDNAECVPF SMPVESAKPL NSVTPTDPVT QSTNPGGNST  300
TTPIDGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-07NAC family protein