PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1299170.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 351aa    MW: 39476.6 Da    PI: 5.6899
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1299170.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.15.9e-0889158269
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr...traetrtgCkaklkvk 69 
                        +Y++Y+++ GF v k++s++  ++g+ +  t  C +egk++++++++ +++    ++  +  + k+++ ++
  Pd.00g1299170.m01  89 YYKQYGRQSGFPVIKRSSTNG-DDGNLKYVTISCAREGKSKTQRSAKMQKNFddiKELANDSDDKCMVAMN 158
                        8************99987776.9999**************9999884444332333333344444454444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MGTRISASES EDTSHINNNS PIDQGMEESS ARLENNQHDD AVEMNFNGIE KENNGDETEN  60
NDTVMSVEEK VQDPQVGMIF DSIDEVITYY KQYGRQSGFP VIKRSSTNGD DGNLKYVTIS  120
CAREGKSKTQ RSAKMQKNFD DIKELANDSD DKCMVAMNWM HNLKEEICKH DGTCKRTEPT  180
PQSPIGKSFE PDVNGLPNAS QRILTPLPVR SKGRPPFKRR QSKTEQVIKK RQRTGRKTKY  240
RQDNTDGGTE IPAQSDVFCH TDAPPICESD NLVGTQESNN VVMLLGLTHG GHPDQLYKRP  300
LTGNITYPTI HENYFQGDQY QNWKGGSGLY NLALVQEEMI TKNSSENRSK S