PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g130380.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 742aa MW: 83324.1 Da PI: 5.895

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g130380.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.6	2.7e-19	618	704	2	84
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkl 84 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++ +W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ Pd.00g130380.m01 618 QKVLKQSDVGSLGRIVLPKKEAETHlpELEARDGISIPMEDiGTSHVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIYS 704 79***********************999999****7777*****777777777777.****************993 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MEELEDQEDN LGVDPSEMWL DDNDQETALL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS 60 STPAPVKSVT SSSTSSSVSS SSSAASWAIL RSDAEEDGER RQQHHHNSYN HRHQYSQADD 120 QGVDAHALSS TASMEISQPS DLGREGGAMD CMGAMETFGY MDLFESNEFF DPSSIFQSDS 180 LLMEQFQQDD DHQQLLAPHQ LQDPNEATAI IPQQQQEQEV AVRDEENNKK DDQKENKEPD 240 DMAMVFLEWL RSNRETVSAE DLRSVKIKKS TIECAARRLG GGKEAMKQLL KLVLEWVQTN 300 HLQKRRSNSL TTKDADIVAQ QQQYQDPFQN PNPNTSPRVL ESNPSCSFTQ TPWMAPPPHS 360 AYDHAGGILV PTQPPPPPPA AYPSMMGYIA PDQYVNGPGP YQPSPEYHHM IDSGQPTWPS 420 SQFGMGTAHY GSFPDNNIHL APPPQHHPQA FAGYGSQYQP YQYFPLNGEH QMMRLGSSAT 480 KEARKKRMAR QRRLVSHHRH GHQQQQHLNV QMPDHLLHQQ HTRLVGNAAD LNCANSVPLQ 540 ANPGNWFYWP TATAAPSPSP AMMPSITQEA APPPPVQQMD RPASTQAQNY NQGRSAAQER 600 QERRQGWKSE KNLKFLLQKV LKQSDVGSLG RIVLPKKEAE THLPELEARD GISIPMEDIG 660 TSHVWNMRYR YWPNNKSRMY LLENTGDFVR ANGLQEGDFI VIYSDVKYDT RSEGTASRAK 720 IRGQQKAGKV SKEPACKHSS WH

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MEELEDQEDN LGVDPSEMWL DDNDQETALL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS  60
STPAPVKSVT SSSTSSSVSS SSSAASWAIL RSDAEEDGER RQQHHHNSYN HRHQYSQADD  120
QGVDAHALSS TASMEISQPS DLGREGGAMD CMGAMETFGY MDLFESNEFF DPSSIFQSDS  180
LLMEQFQQDD DHQQLLAPHQ LQDPNEATAI IPQQQQEQEV AVRDEENNKK DDQKENKEPD  240
DMAMVFLEWL RSNRETVSAE DLRSVKIKKS TIECAARRLG GGKEAMKQLL KLVLEWVQTN  300
HLQKRRSNSL TTKDADIVAQ QQQYQDPFQN PNPNTSPRVL ESNPSCSFTQ TPWMAPPPHS  360
AYDHAGGILV PTQPPPPPPA AYPSMMGYIA PDQYVNGPGP YQPSPEYHHM IDSGQPTWPS  420
SQFGMGTAHY GSFPDNNIHL APPPQHHPQA FAGYGSQYQP YQYFPLNGEH QMMRLGSSAT  480
KEARKKRMAR QRRLVSHHRH GHQQQQHLNV QMPDHLLHQQ HTRLVGNAAD LNCANSVPLQ  540
ANPGNWFYWP TATAAPSPSP AMMPSITQEA APPPPVQQMD RPASTQAQNY NQGRSAAQER  600
QERRQGWKSE KNLKFLLQKV LKQSDVGSLG RIVLPKKEAE THLPELEARD GISIPMEDIG  660
TSHVWNMRYR YWPNNKSRMY LLENTGDFVR ANGLQEGDFI VIYSDVKYDT RSEGTASRAK  720
IRGQQKAGKV SKEPACKHSS WH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-122	B3 family protein