PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1303920.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 1051aa MW: 118598 Da PI: 7.0962

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1303920.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.9	5.4e-21	84	174	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY++YA +GFs+r+s+ ++s + g ++ r++vCskeg+r+++ ++ ++ r++r+etr +C+a++ vk ++ + vtk+++eH+H la Pd.00g1303920.m01 84 RFYCNYALAIGFSIRRSRLRRS-KGGVVMGRQWVCSKEGSRSKKWTNrDDMVRTPRKETRENCHATFAVKYCPkRDAYIVTKFVKEHSHGLA 174 5******************9.8889***********9988846677889*************999************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 1051 aa Download sequence
MEAETSKTNG IQGQKSVLNS EGYFSEAESL EETENVPYLQ ILDSRTEEST EKSGQFEYDG 60 LNFQNMSIAD FAEREFAKVE EAERFYCNYA LAIGFSIRRS RLRRSKGGVV MGRQWVCSKE 120 GSRSKKWTNR DDMVRTPRKE TRENCHATFA VKYCPKRDAY IVTKFVKEHS HGLANSRETE 180 VAYKRLKAEF GRLNTLVETW KEQHEQTSLN LGCHNNIVRD PIVAKTKGKQ TTGSKGKKAP 240 QCGECKVTGH NKRNCPNRIV GEGGKRKRGY TRDMSNIQSS FGPEDDTSFG NKTFYSASSC 300 VHGTKTLSSS YTTPNSGFSC GEMSSGSTHY TSDGFTFEPP EYSVLESQFD TQDTSPRDCL 360 SVVNMGKKPS TNKSTSQNRC KGKGLVPTLV ARNTAVKGNN NRSVVTSQRG SSSTASHSNP 420 VDHPFFGVRR YTHKNHNSSD PVLHVNVTNH LSYKNNLTHI KGCGNNTLCG LWYRHELPPR 480 VQEKVAYAGF ADFAILLGTK GRRDKHLLMA LAERWWDTTH TFHLDEVGEL TMTPKDFSAI 540 TGLPVCGKSL KYDMEAHTKT EEVVRLFGTP IRSILNAKMK YRDIVNKYKR WKPQTPEQED 600 QLTRVFILAV LGSSLCNDKS DSVYLYYMPS LAKVEEIKDY NWGGAGLACM YLCMDALSRG 660 LVRSIGGYWR AWEVWACEYL KPLALTRPLS DVESFPRAYR WLSARDVRET SHKLEHFRTT 720 LRYISTDQVN WHPWGIDDAN LHDYVQKSIP MTKQRILLQG PAGYAWYLGE RVSVQSLGTA 780 ESQVPTRPPR TMLKDMKVHA SDKEIKAALK GFDAEDWLAE TTDYKLFRNE VQKKVCPLLV 840 LCVSSWSVSV VGWGDTDDCE VLDIPRGKSS TCLPLPEDVK YVSASTATEL LDMISGLNSL 900 LFTNRMAART IISELRQGTH TQHKQNPLAT KEIADAEDDC DFETSSEDDE DNDNGFETSS 960 EDGEEDEENV EDEEDEEHVE DEEVEEIRDE EDEVLVEETT TKSPPPNTKG KGVVAIKGKG 1020 KASPKKRKIS LSEQEPEPHP ISKRLRLRKK T

Sequence ? help Back to Top

Protein Sequence Length: 1051 aa Download sequence

MEAETSKTNG IQGQKSVLNS EGYFSEAESL EETENVPYLQ ILDSRTEEST EKSGQFEYDG  60
LNFQNMSIAD FAEREFAKVE EAERFYCNYA LAIGFSIRRS RLRRSKGGVV MGRQWVCSKE  120
GSRSKKWTNR DDMVRTPRKE TRENCHATFA VKYCPKRDAY IVTKFVKEHS HGLANSRETE  180
VAYKRLKAEF GRLNTLVETW KEQHEQTSLN LGCHNNIVRD PIVAKTKGKQ TTGSKGKKAP  240
QCGECKVTGH NKRNCPNRIV GEGGKRKRGY TRDMSNIQSS FGPEDDTSFG NKTFYSASSC  300
VHGTKTLSSS YTTPNSGFSC GEMSSGSTHY TSDGFTFEPP EYSVLESQFD TQDTSPRDCL  360
SVVNMGKKPS TNKSTSQNRC KGKGLVPTLV ARNTAVKGNN NRSVVTSQRG SSSTASHSNP  420
VDHPFFGVRR YTHKNHNSSD PVLHVNVTNH LSYKNNLTHI KGCGNNTLCG LWYRHELPPR  480
VQEKVAYAGF ADFAILLGTK GRRDKHLLMA LAERWWDTTH TFHLDEVGEL TMTPKDFSAI  540
TGLPVCGKSL KYDMEAHTKT EEVVRLFGTP IRSILNAKMK YRDIVNKYKR WKPQTPEQED  600
QLTRVFILAV LGSSLCNDKS DSVYLYYMPS LAKVEEIKDY NWGGAGLACM YLCMDALSRG  660
LVRSIGGYWR AWEVWACEYL KPLALTRPLS DVESFPRAYR WLSARDVRET SHKLEHFRTT  720
LRYISTDQVN WHPWGIDDAN LHDYVQKSIP MTKQRILLQG PAGYAWYLGE RVSVQSLGTA  780
ESQVPTRPPR TMLKDMKVHA SDKEIKAALK GFDAEDWLAE TTDYKLFRNE VQKKVCPLLV  840
LCVSSWSVSV VGWGDTDDCE VLDIPRGKSS TCLPLPEDVK YVSASTATEL LDMISGLNSL  900
LFTNRMAART IISELRQGTH TQHKQNPLAT KEIADAEDDC DFETSSEDDE DNDNGFETSS  960
EDGEEDEENV EDEEDEEHVE DEEVEEIRDE EDEVLVEETT TKSPPPNTKG KGVVAIKGKG  1020
KASPKKRKIS LSEQEPEPHP ISKRLRLRKK T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	3e-15	FAR1 family protein