PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1303920.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 186aa    MW: 21414.9 Da    PI: 8.5995
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1303920.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.12.6e-2284174190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                        +fY++YA  +GFs+r+s+ ++s + g ++ r++vCskeg+r+++ ++ ++  r++r+etr +C+a++ vk    ++ + vtk+++eH+H la
  Pd.00g1303920.m02  84 RFYCNYALAIGFSIRRSRLRRS-KGGVVMGRQWVCSKEGSRSKKWTNrDDMVRTPRKETRENCHATFAVKYCPkRDAYIVTKFVKEHSHGLA 174
                        5********************9.8889***************9988846677889*****************999**************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MEAETSKTNG IQGQKSVLNS EGYFSEAESL EETENVPYLQ ILDSRTEEST EKSGQFEYDG  60
LNFQNMSIAD FAEREFAKVE EAERFYCNYA LAIGFSIRRS RLRRSKGGVV MGRQWVCSKE  120
GSRSKKWTNR DDMVRTPRKE TRENCHATFA VKYCPKRDAY IVTKFVKEHS HGLANSHRSR  180
LQEAKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-17FAR1 family protein