PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1307530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 142aa MW: 16226.5 Da PI: 8.7908

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1307530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.8e-05	84	107	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +C+ dC sF+rk++L+rH H Pd.00g1307530.m01 84 VCSvdDCRSSFRRKDHLNRHFLQH 107 79999***************7766 PP
2	zf-C2H2	15	7.3e-05	112	137	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ F ++ n + H + H Pd.00g1307530.m01 112 FKCPieNCNRGFVSQGNIRMHVKElH 137 89********************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MREVSDFNGP VSGGRPPVKL HQVNLNHVLL GIDILKKYLF DNVEHWIPHK ELQNARGFDL 60 NGPVPGGRPP GKLHQAGLNN WPCVCSVDDC RSSFRRKDHL NRHFLQHQGK LFKCPIENCN 120 RGFVSQGNIR MHVKELHNED DP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.1	3e-20	C2H2 family protein