PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g131430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

LBD

Protein Properties

Length: 241aa MW: 26733.7 Da PI: 6.4254

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g131430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	113.9	1.1e-35	8	109	1	100
DUF260 1 aCaaCkvlrrkCakd.Cvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 +C aCk+lrrkC+k+ Cv+apyf++e+ + +f ++h++FGas+v+kll++lp ++r a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+ Pd.00g131430.m01 8 PCGACKFLRRKCVKElCVFAPYFCHEEgATHFSAIHEVFGASKVSKLLAHLPLSDRCGAAVTISYEAQARLQDPIYGCVSHIFALQQQVFNLQ 100 7**********999*****9989************************************************************ PP DUF260 92 aelallkee 100 a+la+lk++ Pd.00g131430.m01 101 AQLASLKDQ 109 **99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MAGSKHVPCG ACKFLRRKCV KELCVFAPYF CHEEGATHFS AIHEVFGASK VSKLLAHLPL 60 SDRCGAAVTI SYEAQARLQD PIYGCVSHIF ALQQQVFNLQ AQLASLKDQA AQSFVNGSAV 120 ANPNEKFYGK LPSHTEEAQS WFPEFEKSSN SMPQFNSTHI NNPGTTSYYE NGIMNSNNSV 180 NGSYENSVNI PEENVSYGSF EEGTSHSMSS FGMQTNYNRQ WGFQDADELQ SVVFSYIHKH 240 S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	6e-64	LBD family protein