PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g134000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family BBR-BPC
Protein Properties Length: 319aa    MW: 35247.6 Da    PI: 9.6469
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g134000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind340.54.1e-104423191301
         GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnk 80 
                       mddd+ + rn+gyyep+  +k +lglqlmss+aerd+k     r+  + + ++++a+++rd          ++ +rd+++++        ++k
  Pd.00g134000.m01  42 MDDDALNMRNWGYYEPS--FKGHLGLQLMSSMAERDTKAfvpgRDPSV-MVSSNGAFHPRDcvvsdapvpLNY-MRDSWVNQ--------RDK 122
                       9***9999*******99..*******************99*9999999.99**********999999999999.99999999........789 PP

         GAGA_bind  81 llalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksek 173
                       +l++++++ +        + vl++t+ ++slq      l+++     e+    ++p+      +ke  ++kkr  +  pk++k kk++k    
  Pd.00g134000.m01 123 FLNMMPANPN--------YAVLPETSGAHSLQI-----LQPPDSSRDERVARIEEPV-----ANKEGGTSKKRGGGGAPKTPKVKKPRK---- 193
                       *****96654........899********9999.....5544444223332233333.....333444444455555555555555555.... PP

         GAGA_bind 174 skkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafk 266
                       +k++ +++s+ +r+k  kks+d+v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafk
  Pd.00g134000.m01 194 PKDN-NNPSV-PRVKPAKKSLDVVINGINMDISGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFK 284
                       2223.33443.689******************************************************************************* PP

         GAGA_bind 267 klLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                       k+LekLaaeGy+++np+DL+ hWA+HGtnkfvtir
  Pd.00g134000.m01 285 KVLEKLAAEGYNFANPIDLRGHWARHGTNKFVTIR 319
                       **********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVFGLKEFCC PCAVGYELCL DFELHLPSLA VFRAVYTHLT LMDDDALNMR NWGYYEPSFK  60
GHLGLQLMSS MAERDTKAFV PGRDPSVMVS SNGAFHPRDC VVSDAPVPLN YMRDSWVNQR  120
DKFLNMMPAN PNYAVLPETS GAHSLQILQP PDSSRDERVA RIEEPVANKE GGTSKKRGGG  180
GAPKTPKVKK PRKPKDNNNP SVPRVKPAKK SLDVVINGIN MDISGIPIPV CSCTGAPQQC  240
YRWGCGGWQS ACCTTNVSMY PLPMSTKRRG ARIAGRKMSQ GAFKKVLEKL AAEGYNFANP  300
IDLRGHWARH GTNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-109BBR-BPC family protein