PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g134310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 250aa    MW: 28677.6 Da    PI: 8.6958
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g134310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.17.7e-35211122102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k ye+++d++ +++i wse+g+sfv++d+++f+  +LpkyFkhsnf+SF+RQLn+YgF+k+++++         w F+++ F +g+k+ll
  Pd.00g134310.m01  21 FLRKCYEMVDDNDADSIIAWSETGDSFVIWDMTQFSILLLPKYFKHSNFSSFMRQLNIYGFRKIDSDR---------WVFANEGFIRGQKHLL 104
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++i r+k+
  Pd.00g134310.m01 105 KNISRRKH 112
                       *****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MLKSAGKSGD GSGSGGSVAP FLRKCYEMVD DNDADSIIAW SETGDSFVIW DMTQFSILLL  60
PKYFKHSNFS SFMRQLNIYG FRKIDSDRWV FANEGFIRGQ KHLLKNISRR KHPQGTDQRK  120
ALQQKDNPDG PCENIVENGL WREVENLKTD KVALKQELVK LRQHQEISEN NLLLLRNRLR  180
GMEKNQQQML SFLVMAMQSP GFLVQLLQPK ENSWRIAEPG NMLEQGVDDG IPITSDGAIV  240
RWNERFSRES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.13e-81HSF family protein