PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g135850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 600aa MW: 66673.8 Da PI: 6.2722

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g135850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	61.8	1.3e-19	237	289	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k r +WtpeLH +F a++ L G k Pk+il+lm+v+ +t+ +v+SHLQkY+ Pd.00g135850.m01 237 KHRAVWTPELHLKFTAALSAL-GDLKSRPKAILKLMNVPNITVRQVASHLQKYK 289 6899***************.9999*************************7 PP
2	Myb_DNA-binding	31.9	3.2e-10	241	289	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++ a lG ++k+I + m+ + t q+ s++qky+ Pd.00g135850.m01 241 VWTPELHLKFTAALSALGDLksRPKAILKLMNvPNITVRQVASHLQKYK 289 7***************77**************************7 PP
3	Response_reg	57.4	8e-20	21	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 +l+vd + l ++ +++ le+ + +v++++ ++ al ++ e++ + l++ i+mp+md l +l+ ++++e +p+i+++++ + + a+++l Pd.00g135850.m01 21 ILLVDHDTLSLMCIASTLEQYSF-KVTTTEMASVALSMITEQKddYKLVMANINMPDMDSLSFLRVLHRKE--IPVIFMSSEMNVNVAKKVLA 110 89*******************.***********666656******************9988..**************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga fl+Kp++ e+l Pd.00g135850.m01 111 EGACFFLEKPISLEDLKS 128 ************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MEHMSRTETN GLPSFAHDLK ILLVDHDTLS LMCIASTLEQ YSFKVTTTEM ASVALSMITE 60 QKDDYKLVMA NINMPDMDSL SFLRVLHRKE IPVIFMSSEM NVNVAKKVLA EGACFFLEKP 120 ISLEDLKSMW QHVYRKIRTP KHKPNCGTKM NSGKDCQGIK INEAGVVLRP PLGGVKRNEA 180 GGECSLATGH ALDIDKQNTC TLTCKAQGAS GIKRPIDDKE EQEEVNRDSN GTTGNKKHRA 240 VWTPELHLKF TAALSALGDL KSRPKAILKL MNVPNITVRQ VASHLQKYKN QVQRIRGTDT 300 TSLPSSLRRL SNCINGNEFP PAKQSSLVCQ YDQRTSSFGV QGHTAQLDAP NSLITSPIPV 360 AGFNNHDYRR QNLYSGHTIL SHYTNHHTNN PSEFYLRTQG QFQNLNQIRE TSSFGYGAGM 420 NEIMNQQPLG IEENSFRTSE SHFPSMNYIT PEAAASPYIS GNTFQVPKEP SVMNQEQYYT 480 SSLIGPFDSQ NQNQFSTEGA RLTTEVLELV PEQIASGNAT NPNKFPADFN DGSQKLDTTA 540 GEASSPNENQ PLSEYDQLLK LLEEDPQEAS CVGSVPNAGD ADRYCEWLRE TLLENSTDPL

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MEHMSRTETN GLPSFAHDLK ILLVDHDTLS LMCIASTLEQ YSFKVTTTEM ASVALSMITE  60
QKDDYKLVMA NINMPDMDSL SFLRVLHRKE IPVIFMSSEM NVNVAKKVLA EGACFFLEKP  120
ISLEDLKSMW QHVYRKIRTP KHKPNCGTKM NSGKDCQGIK INEAGVVLRP PLGGVKRNEA  180
GGECSLATGH ALDIDKQNTC TLTCKAQGAS GIKRPIDDKE EQEEVNRDSN GTTGNKKHRA  240
VWTPELHLKF TAALSALGDL KSRPKAILKL MNVPNITVRQ VASHLQKYKN QVQRIRGTDT  300
TSLPSSLRRL SNCINGNEFP PAKQSSLVCQ YDQRTSSFGV QGHTAQLDAP NSLITSPIPV  360
AGFNNHDYRR QNLYSGHTIL SHYTNHHTNN PSEFYLRTQG QFQNLNQIRE TSSFGYGAGM  420
NEIMNQQPLG IEENSFRTSE SHFPSMNYIT PEAAASPYIS GNTFQVPKEP SVMNQEQYYT  480
SSLIGPFDSQ NQNQFSTEGA RLTTEVLELV PEQIASGNAT NPNKFPADFN DGSQKLDTTA  540
GEASSPNENQ PLSEYDQLLK LLEEDPQEAS CVGSVPNAGD ADRYCEWLRE TLLENSTDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	2e-49	ARR-B family protein