PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g137510.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family CAMTA
Protein Properties Length: 140aa    MW: 16385.4 Da    PI: 10.6927
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g137510.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-198.84.4e-3126101377
              CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg 77 
                       +e k+rwl+++ei+aiL n++ +++  ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LK  +
  Pd.00g137510.m02  26 EEaKSRWLRPNEIHAILYNYKYFTIYVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKKRN 101
                       4559*********************************************************************766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MEKQLEGSEI HGFHTMQDLD VGTIMEEAKS RWLRPNEIHA ILYNYKYFTI YVKPVNLPKS  60
GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKKR NAIPTRTMRL VMKKGFMYTM  120
HMAKIAQPLS GGVIGCLIRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16940.14e-56CAMTA family protein