PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g138100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 261aa    MW: 28472.7 Da    PI: 8.8562
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g138100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16e-20108157255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        y+G+r+++ +g+W+AeIrdp     +  r++lg++ taeeAa+a++ a+++++g
  Pd.00g138100.m01 108 VYRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTYNTAEEAARAYDDAARRIRG 157
                       69*******.**********72....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MCGGAIISDF ISAKRGRTLT AEDLWTEFDT ISDLLGLDHS SSSNNNNNNK DQFEHQQNNK  60
RVAQKPKIAL SKGAGTSEKP KKTSPDAGAQ KEEVGKASDK NKRVRKNVYR GIRQRPWGKW  120
AAEIRDPHKG VRVWLGTYNT AEEAARAYDD AARRIRGGKA KLNFPELPPS SVPAPATPPL  180
KKRCVVGPAE STQSSLESSG NYCNYDPFEG GEIYGKKEVG SEHELKEQIS SLELFLGLDE  240
EGPSEVNGRG GAVLKEQSCS G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-40ERF family protein