PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g140940.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 974aa MW: 107095 Da PI: 7.0499

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g140940.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.3	2.3e-16	548	585	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkk+kClk+YC+Cfaag++C+e+C C++C+N + Pd.00g140940.m01 548 TKRCNCKKTKCLKLYCDCFAAGVYCAESCACQGCFNIT 585 699*********************************76 PP
2	TCR	50.2	5e-16	625	663	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+C++CkN Pd.00g140940.m01 625 RHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCDGCKNV 663 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 974 aa Download sequence
MAFALNFGEN KNKIQLIFKS LHLVLGKTII KIKANTTSSS DSPPVQDSPV FSYINNLSPI 60 QPVKASHLAQ GFPGLNSPPL VFTSPRINSH RDTSFLKRPK YQPLSSAEKC KTQDEAKKFL 120 DGPVDPKISQ LHMRLITDSQ DRETKICVES QQCSSSEGVD EYLADPSEVD CVDSTQSASP 180 CLKQSNNVPE TFTGSKETTL YDNKHNTRTD LGTEAKAQSE QAKEDLEGKQ TFYAKPVNII 240 EQSDGELPYD ECPNIESGLS VNNAYKREYC QHLHDQDRGG KHEDDCDHTP QSPPGRLQIV 300 QMYENSAENV GAISKGMIGN MILHAPKARS EQGGMHRRCL QFEEAPPCAT GKRDCSLSSI 360 QEVNYSEPPS GTGESKLVKL SYADLKATSK RQMGTPLPPR FGGNSPSTVP KPSGIGLHLN 420 SIVNAAPLVR GTTRSIKLAD HYIGVQVMKS ASVMSSHLPD NVRCHSILLN MVEKDSAGPE 480 DRDESETSIA ESSAVPQSPH TVVFEHHGPT HEKRGLDAEN VDDYEECKQS SPKKKRKKTS 540 STKDSDGTKR CNCKKTKCLK LYCDCFAAGV YCAESCACQG CFNITDYEDT VLETRQHIES 600 RNPLAFAPKI VQHEEEVQFT PSSARHKRGC NCKKSMCLKK YCECYQANVG CSSGCRCDGC 660 KNVYGRKGGY IPIEHGVGKD NVSDKAGKER IESTFDEKLE MVATKKDILS TELYDSHNLT 720 PLAPSFQCSD HANNVPKSPC LPTSYLPSPE SDLTIISSYE KSTRSPLRHS ESSDILLETS 780 KELSDLGSYN WRVDYDNIGI ADTFSPRCDA APTTCHITPM SDLCSMAMVS SASSKTSDWT 840 NASQVQLCPG SHSLSSDSSL HRRSSPVTPM TRLGGTKSCQ GLDFENGLYD ILQDDTPEIL 900 KDSSTPIRSL KVSSPNKKRV SPPHSHNHEL GASSSGALRS GRKFILKAKE MIDIYGVHVY 960 FKVSLVFTFP TWAQ

Sequence ? help Back to Top

Protein Sequence Length: 974 aa Download sequence

MAFALNFGEN KNKIQLIFKS LHLVLGKTII KIKANTTSSS DSPPVQDSPV FSYINNLSPI  60
QPVKASHLAQ GFPGLNSPPL VFTSPRINSH RDTSFLKRPK YQPLSSAEKC KTQDEAKKFL  120
DGPVDPKISQ LHMRLITDSQ DRETKICVES QQCSSSEGVD EYLADPSEVD CVDSTQSASP  180
CLKQSNNVPE TFTGSKETTL YDNKHNTRTD LGTEAKAQSE QAKEDLEGKQ TFYAKPVNII  240
EQSDGELPYD ECPNIESGLS VNNAYKREYC QHLHDQDRGG KHEDDCDHTP QSPPGRLQIV  300
QMYENSAENV GAISKGMIGN MILHAPKARS EQGGMHRRCL QFEEAPPCAT GKRDCSLSSI  360
QEVNYSEPPS GTGESKLVKL SYADLKATSK RQMGTPLPPR FGGNSPSTVP KPSGIGLHLN  420
SIVNAAPLVR GTTRSIKLAD HYIGVQVMKS ASVMSSHLPD NVRCHSILLN MVEKDSAGPE  480
DRDESETSIA ESSAVPQSPH TVVFEHHGPT HEKRGLDAEN VDDYEECKQS SPKKKRKKTS  540
STKDSDGTKR CNCKKTKCLK LYCDCFAAGV YCAESCACQG CFNITDYEDT VLETRQHIES  600
RNPLAFAPKI VQHEEEVQFT PSSARHKRGC NCKKSMCLKK YCECYQANVG CSSGCRCDGC  660
KNVYGRKGGY IPIEHGVGKD NVSDKAGKER IESTFDEKLE MVATKKDILS TELYDSHNLT  720
PLAPSFQCSD HANNVPKSPC LPTSYLPSPE SDLTIISSYE KSTRSPLRHS ESSDILLETS  780
KELSDLGSYN WRVDYDNIGI ADTFSPRCDA APTTCHITPM SDLCSMAMVS SASSKTSDWT  840
NASQVQLCPG SHSLSSDSSL HRRSSPVTPM TRLGGTKSCQ GLDFENGLYD ILQDDTPEIL  900
KDSSTPIRSL KVSSPNKKRV SPPHSHNHEL GASSSGALRS GRKFILKAKE MIDIYGVHVY  960
FKVSLVFTFP TWAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	534	538	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	2e-54	CPP family protein